Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphodiesterase | EC382_RS04545 | Not Available | Negative | 973660 - 974211 | 19992.1 |
| glutathione transferase | EC382_RS04550 | Not Available | Negative | 974267 - 974911 | 24283.0 |
| gsh-dependent disulfide bond oxidoreductase | EC382_RS04555 | Not Available | Positive | 975047 - 975694 | 24445.2 |
| dihydroneopterin triphosphate 2'-epimerase | EC382_RS04560 | Not Available | Positive | 975751 - 976113 | 14082.8 |
| tigr01777 family protein | EC382_RS04565 | Not Available | Positive | 976134 - 977027 | 32776.8 |
| rpn family recombination-promoting nuclease/putative transposase | EC382_RS04570 | Not Available | Negative | 977075 - 977965 | 34182.4 |
| histidine abc transporter atp-binding protein hisp | EC382_RS04575 | Not Available | Negative | 978162 - 978935 | 28610.8 |
| abc transporter permease | EC382_RS04580 | Not Available | Negative | 978943 - 979659 | 26871.3 |
| abc transporter permease subunit | EC382_RS04585 | Not Available | Negative | 979656 - 980342 | 24634.8 |
| histidine abc transporter substrate-binding protein hisj | EC382_RS04590 | Not Available | Negative | 980432 - 981214 | 28499.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





