Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal phosphate-dependent aminotransferase | EC382_RS04495 | Not Available | Positive | 961986 - 963203 | 45519.9 |
| 5'-deoxynucleotidase | EC382_RS04500 | Not Available | Positive | 963287 - 963886 | 22695.3 |
| slc13 family permease | EC382_RS04505 | Not Available | Negative | 963945 - 965777 | 65876.0 |
| hexitol phosphatase hpxa | EC382_RS04510 | Not Available | Negative | 965864 - 966514 | 23012.8 |
| yfbu family protein | EC382_RS04515 | Not Available | Negative | 966525 - 967019 | 19537.4 |
| duf412 domain-containing protein | EC382_RS04520 | Not Available | Negative | 967103 - 967558 | 17214.1 |
| acetate kinase | EC382_RS04525 | Not Available | Positive | 967896 - 969098 | 43278.9 |
| phosphate acetyltransferase | EC382_RS04530 | Not Available | Positive | 969173 - 971317 | 77162.5 |
| putative basic amino acid antiporter yfcc | EC382_RS04535 | Not Available | Positive | 971507 - 973027 | 54814.1 |
| nudix hydrolase yfcd | EC382_RS04540 | Not Available | Negative | 973060 - 973602 | 20376.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





