Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | EC382_RS04395 | Not Available | Negative | 938040 - 938501 | 17420.7 |
| ribonuclease bn | EC382_RS04400 | Not Available | Positive | 938566 - 939483 | 32979.7 |
| deubiquitinase | EC382_RS04405 | Not Available | Positive | 939674 - 940894 | 46551.0 |
| vwa domain-containing protein | EC382_RS04410 | Not Available | Negative | 940965 - 942692 | 63566.3 |
| m28 family peptidase | EC382_RS04415 | Not Available | Positive | 942880 - 943800 | 33905.0 |
| yfbm family protein | EC382_RS04420 | Not Available | Positive | 943903 - 944406 | 19019.8 |
| nadh-quinone oxidoreductase subunit nuon | EC382_RS04425 | Not Available | Negative | 944473 - 945930 | 52047.3 |
| nadh-quinone oxidoreductase subunit m | EC382_RS04430 | Not Available | Negative | 945937 - 947466 | 56527.9 |
| nadh-quinone oxidoreductase subunit l | EC382_RS04435 | Not Available | Negative | 947630 - 949471 | 66412.1 |
| nadh-quinone oxidoreductase subunit nuok | EC382_RS04440 | Not Available | Negative | 949468 - 949770 | 10845.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





