Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-amino-4-deoxy-l-arabinose-phosphoundecaprenol flippase subunit arne | EC382_RS04345 | Not Available | Positive | 929515 - 929850 | 12192.7 |
| 4-amino-4-deoxy-l-arabinose-phosphoundecaprenol flippase subunit arnf | EC382_RS04350 | Not Available | Positive | 929850 - 930236 | 14086.0 |
| signal transduction protein pmrd | EC382_RS04355 | Not Available | Negative | 930230 - 930496 | 9887.09 |
| o-succinylbenzoate--coa ligase | EC382_RS04360 | Not Available | Negative | 930606 - 931961 | 50128.4 |
| o-succinylbenzoate synthase | EC382_RS04365 | Not Available | Negative | 931958 - 932920 | 35406.5 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | EC382_RS04370 | Not Available | Negative | 932920 - 933777 | 31620.8 |
| 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase | EC382_RS04375 | Not Available | Negative | 933792 - 934550 | 27797.0 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | EC382_RS04380 | Not Available | Negative | 934547 - 936217 | 61322.5 |
| isochorismate synthase menf | EC382_RS04385 | Not Available | Negative | 936306 - 937601 | 48824.3 |
| stress response protein elab | EC382_RS04390 | Not Available | Negative | 937680 - 937985 | 11306.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





