Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iclr family transcriptional regulator | EC382_RS04295 | Not Available | Negative | 918387 - 919169 | 28962.9 |
| nicotinamide mononucleotide deamidase-related protein yfay | EC382_RS04300 | Not Available | Negative | 919389 - 920591 | 44228.2 |
| hypothetical protein | EC382_RS04305 | Not Available | Negative | 920691 - 921233 | 18624.8 |
| nucleoside triphosphatase nudi | EC382_RS04310 | Not Available | Positive | 921512 - 921937 | 16398.7 |
| histidine phosphatase family protein | EC382_RS04315 | Not Available | Negative | 921976 - 922578 | 22291.8 |
| udp-4-amino-4-deoxy-l-arabinose aminotransferase | EC382_RS04320 | Not Available | Positive | 922886 - 924025 | 41632.2 |
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | EC382_RS04325 | Not Available | Positive | 924029 - 924997 | 36339.3 |
| bifunctional udp-4-amino-4-deoxy-l-arabinose formyltransferase/udp-glucuronic acid oxidase arna | EC382_RS04330 | Not Available | Positive | 924997 - 926979 | 74261.1 |
| 4-deoxy-4-formamido-l-arabinose- phosphoundecaprenol deformylase | EC382_RS04335 | Not Available | Positive | 926976 - 927866 | 33113.6 |
| lipid iv(a) 4-amino-4-deoxy-l-arabinosyltransferase | EC382_RS04340 | Not Available | Positive | 927866 - 929518 | 62546.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





