Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane integrity-associated transporter subunit pqia | EC382_RS03995 | Not Available | Positive | 869754 - 871007 | 46436.2 |
| intermembrane transport protein pqib | EC382_RS04000 | Not Available | Positive | 871012 - 872652 | 60497.0 |
| membrane integrity-associated transporter subunit pqic | EC382_RS04005 | Not Available | Positive | 872649 - 873212 | 20605.5 |
| ribosome modulation factor | EC382_RS04010 | Not Available | Positive | 873468 - 873635 | 6507.88 |
| bifunctional 3-hydroxydecanoyl-acp dehydratase/trans-2-decenoyl-acp isomerase | EC382_RS04015 | Not Available | Negative | 873705 - 874223 | 18969.2 |
| lon protease family protein | EC382_RS04020 | Not Available | Negative | 874292 - 876052 | 65770.3 |
| macrodomain ter protein matp | EC382_RS04025 | Not Available | Positive | 876238 - 876690 | 17694.4 |
| porin ompa | EC382_RS04030 | Not Available | Negative | 876766 - 877821 | 37713.2 |
| cell division inhibitor sula | EC382_RS04035 | Not Available | Negative | 878178 - 878687 | 18812.5 |
| crp-s regulon transcriptional coactivator sxy | EC382_RS04040 | Not Available | Positive | 878906 - 879535 | 24148.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





