Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone | EC382_RS03940 | Not Available | Positive | 856243 - 856944 | 25390.9 |
| fimbrial protein | EC382_RS03950 | Not Available | Positive | 859560 - 860630 | 37889.8 |
| fimbrial protein | EC382_RS03955 | Not Available | Positive | 860642 - 861184 | 18926.7 |
| type 1 fimbrial protein | EC382_RS03960 | Not Available | Positive | 861192 - 861707 | 18383.8 |
| fimbrial chaperone | EC382_RS03965 | Not Available | Positive | 861673 - 862410 | 26968.8 |
| quinone-dependent dihydroorotate dehydrogenase | EC382_RS03970 | Not Available | Positive | 862521 - 863531 | 36776.8 |
| cell division protein zapc | EC382_RS03975 | Not Available | Positive | 863705 - 864247 | 20566.8 |
| 6-n-hydroxylaminopurine resistance protein ycbx | EC382_RS03980 | Not Available | Negative | 864244 - 865353 | 40609.5 |
| bifunctional 23s rrna (guanine(2069)-n(7))-methyltransferase rlmk/23s rrna (guanine(2445)-n(2))-methyltransferase rlml | EC382_RS03985 | Not Available | Positive | 865597 - 867705 | 78828.5 |
| abc transporter atp-binding protein | EC382_RS03990 | Not Available | Positive | 867717 - 869624 | 72111.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





