Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycbj family phosphotransferase | EC382_RS03840 | Not Available | Positive | 829693 - 830586 | 34489.6 |
| envelope biogenesis factor elyc | EC382_RS03845 | Not Available | Negative | 830563 - 831342 | 28680.0 |
| trna uridine 5-oxyacetic acid(34) methyltransferase cmom | EC382_RS03850 | Not Available | Positive | 831478 - 832263 | 29816.0 |
| chromosome partition protein mukf | EC382_RS03855 | Not Available | Positive | 832260 - 833582 | 50581.7 |
| chromosome partition protein muke | EC382_RS03860 | Not Available | Positive | 833563 - 834267 | 26976.1 |
| chromosome partition protein mukb | EC382_RS03865 | Not Available | Positive | 834267 - 838727 | 170224.0 |
| l,d-transpeptidase | EC382_RS03870 | Not Available | Positive | 838988 - 840835 | 67834.2 |
| ycbk family protein | EC382_RS03875 | Not Available | Positive | 841016 - 841564 | 20355.6 |
| hydroxyacylglutathione hydrolase gloc | EC382_RS03880 | Not Available | Positive | 841591 - 842238 | 23743.4 |
| aspartate/tyrosine/aromatic aminotransferase | EC382_RS03885 | Not Available | Negative | 842289 - 843479 | 43575.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





