Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m48 family metallopeptidase | EC382_RS03790 | Not Available | Positive | 818206 - 818970 | 26768.7 |
| (d)cmp kinase | EC382_RS03795 | Not Available | Positive | 819143 - 819826 | 24747.8 |
| 30s ribosomal protein s1 | EC382_RS03800 | Not Available | Positive | 819937 - 821610 | 61161.5 |
| integration host factor subunit beta | EC382_RS03805 | Not Available | Positive | 821770 - 822054 | 10651.8 |
| comec family protein | EC382_RS03810 | Not Available | Positive | 822261 - 824525 | 84507.0 |
| lipid a abc transporter atp-binding protein/permease msba | EC382_RS03815 | Not Available | Positive | 824562 - 826310 | 64464.6 |
| tetraacyldisaccharide 4'-kinase | EC382_RS03820 | Not Available | Positive | 826307 - 827293 | 35493.2 |
| winged helix-turn-helix domain-containing protein | EC382_RS03825 | Not Available | Positive | 827330 - 828562 | 47676.6 |
| protein ycar | EC382_RS03830 | Not Available | Positive | 828614 - 828796 | 6855.35 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | EC382_RS03835 | Not Available | Positive | 828793 - 829539 | 27610.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





