Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase 4 catalytic subunit hyfg | EC382_RS03285 | Not Available | Negative | 704860 - 706575 | 65193.3 |
| hydrogenase 4 subunit f | EC382_RS03290 | Not Available | Negative | 706565 - 708145 | 56625.4 |
| hydrogenase 4 membrane subunit | EC382_RS03295 | Not Available | Negative | 708150 - 708800 | 23363.0 |
| hydrogenase 4 subunit d | EC382_RS03300 | Not Available | Negative | 708812 - 710251 | 51771.7 |
| hydrogenase 4 subunit hyfc | EC382_RS03305 | Not Available | Negative | 710268 - 711215 | 34315.3 |
| hydrogenase 4 subunit b | EC382_RS03310 | Not Available | Negative | 711226 - 713244 | 72649.5 |
| hydrogenase 4 subunit hyfa | EC382_RS03315 | Not Available | Negative | 713244 - 713861 | 22199.6 |
| thioredoxin-dependent thiol peroxidase | EC382_RS03320 | Not Available | Negative | 714114 - 714584 | 17634.9 |
| glycine cleavage system transcriptional repressor | EC382_RS03325 | Not Available | Negative | 714584 - 715156 | 20769.8 |
| 4-hydroxy-tetrahydrodipicolinate synthase | EC382_RS03330 | Not Available | Positive | 715302 - 716180 | 31285.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





