Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil permease | EC382_RS03235 | Not Available | Positive | 694854 - 696143 | 45063.0 |
| dnaa inactivator hda | EC382_RS03240 | Not Available | Positive | 696193 - 696939 | 28371.4 |
| arsenate reductase (glutaredoxin) | EC382_RS03245 | Not Available | Negative | 697077 - 697436 | 13417.4 |
| beta-barrel assembly-enhancing protease | EC382_RS03250 | Not Available | Negative | 697457 - 698920 | 53911.1 |
| ai-2e family transporter | EC382_RS03255 | Not Available | Positive | 699133 - 700194 | 39210.9 |
| formate transporter | EC382_RS03260 | Not Available | Negative | 700232 - 701080 | 30550.3 |
| sigma-54-dependent fis family transcriptional regulator | EC382_RS03265 | Not Available | Negative | 701102 - 703114 | 75282.7 |
| hydrogenase 4 assembly chaperone hyfj | EC382_RS03270 | Not Available | Negative | 703144 - 703557 | 15524.8 |
| hydrogenase 4 catalytic subunit hyfi | EC382_RS03275 | Not Available | Negative | 703550 - 704308 | 28023.8 |
| hydrogenase 4 subunit h | EC382_RS03280 | Not Available | Negative | 704305 - 704850 | 20100.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





