Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Gene d protein | EC382_RS05890 | Not Available | Positive | 1240458 - 1241582 | 41687.4 |
| Ogr/delta-like zinc finger family protein | EC382_RS05895 | Not Available | Positive | 1241626 - 1241928 | 11390.6 |
| Hypothetical protein | EC382_RS05900 | Not Available | Positive | 1242061 - 1242201 | 5372.89 |
| Attr | Not Available | Not Available | Positive | 1242455 - 1242471 | Not Available |
| Hypothetical protein | EC382_RS05905 | Not Available | Negative | 1242484 - 1242825 | 12867.2 |
| Attl | Not Available | Not Available | Positive | 1334364 - 1334375 | Not Available |
| Putative methylase | EC382_RS06295 | Not Available | Negative | 1334492 - 1335544 | 38544.3 |
| Com | EC382_RS06300 | Not Available | Negative | 1335513 - 1335698 | 7122.61 |
| hypothetical | EC382_RS06305 | Not Available | Positive | 1335813 - 1336278 | 17375.2 |
| Hypothetical protein | EC382_RS06310 | Not Available | Negative | 1336317 - 1336562 | 9046.65 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





