Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 341252 SAMN09457932-rid9462723.guided.102 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1413925 bp
Thymine Count
1399996 bp
Guanine Count
1424723 bp
Cytosine Count
1439242 bp
Genome Length
5697537 bp
Protein-coding Genes
5151 genes
Non-Coding Genes
375 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| u32 family peptidase | E9S89_RS03220 | Not Available | Positive | 623580 - 624575 | 37035.2 |
| u32 family peptidase | E9S89_RS03225 | Not Available | Positive | 624584 - 625462 | 32537.1 |
| llm class flavin-dependent oxidoreductase | E9S89_RS03230 | Not Available | Positive | 625668 - 626675 | 37108.4 |
| tryptophan permease | E9S89_RS03235 | Not Available | Negative | 626793 - 628037 | 44379.2 |
| dead/deah family atp-dependent rna helicase | E9S89_RS03240 | Not Available | Negative | 628191 - 630080 | 70550.5 |
| protein yrbn | E9S89_RS03245 | Not Available | Negative | 630073 - 630153 | 2979.59 |
| lipoprotein nlpi | E9S89_RS03250 | Not Available | Negative | 630260 - 631144 | 33622.5 |
| polyribonucleotide nucleotidyltransferase | E9S89_RS03255 | Not Available | Negative | 631253 - 633388 | 77106.6 |
| 30s ribosomal protein s15 | E9S89_RS03260 | Not Available | Negative | 633635 - 633904 | 10269.4 |
| trna pseudouridine(55) synthase trub | E9S89_RS03265 | Not Available | Negative | 634053 - 634997 | 35089.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





