Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 341252 SAMN09457932-rid9462723.guided.102 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1413925 bp
Thymine Count
1399996 bp
Guanine Count
1424723 bp
Cytosine Count
1439242 bp
Genome Length
5697537 bp
Protein-coding Genes
5151 genes
Non-Coding Genes
375 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator tdca | E9S89_RS03015 | Not Available | Negative | 586185 - 587123 | 34540.9 |
| dna-binding transcriptional activator tdcr | E9S89_RS03020 | Not Available | Positive | 587312 - 587656 | 13703.5 |
| hypothetical protein | E9S89_RS03025 | Not Available | Positive | 587912 - 588451 | 20577.6 |
| yhac family protein | E9S89_RS03030 | Not Available | Positive | 588473 - 589576 | 41741.6 |
| glycerate 2-kinase | E9S89_RS03040 | Not Available | Negative | 590578 - 591723 | 39136.7 |
| 2-hydroxy-3-oxopropionate reductase | E9S89_RS03045 | Not Available | Negative | 591820 - 592710 | 30661.6 |
| 2-dehydro-3-deoxyglucarate aldolase | E9S89_RS03050 | Not Available | Negative | 592740 - 593510 | 27428.7 |
| mfs transporter | E9S89_RS03055 | Not Available | Negative | 593526 - 594605 | 39454.2 |
| galactarate dehydratase | E9S89_RS03060 | Not Available | Positive | 594980 - 596551 | 56372.8 |
| type ii toxin-antitoxin system antitoxin prlf | E9S89_RS03065 | Not Available | Positive | 596700 - 597035 | 12359.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





