Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 341252 SAMN09457932-rid9462723.guided.102 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1413925 bp
Thymine Count
1399996 bp
Guanine Count
1424723 bp
Cytosine Count
1439242 bp
Genome Length
5697537 bp
Protein-coding Genes
5151 genes
Non-Coding Genes
375 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase maturation nickel metallochaperone hypa | E9S89_RS02355 | Not Available | Negative | 448671 - 449012 | 12698.1 |
| hydrogenase-2 assembly chaperone | E9S89_RS02360 | Not Available | Negative | 449005 - 449493 | 17964.7 |
| hyad/hybd family hydrogenase maturation endopeptidase | E9S89_RS02365 | Not Available | Negative | 449486 - 449980 | 17724.8 |
| hydrogenase 2 large subunit | E9S89_RS02370 | Not Available | Negative | 449980 - 451683 | 62494.6 |
| ni/fe-hydrogenase cytochrome b subunit | E9S89_RS02375 | Not Available | Negative | 451680 - 452858 | 43604.6 |
| hydrogenase 2 operon protein hyba | E9S89_RS02380 | Not Available | Negative | 452848 - 453834 | 36005.0 |
| hydrogenase 2 small subunit | E9S89_RS02385 | Not Available | Negative | 453837 - 454955 | 39654.3 |
| duf2623 domain-containing protein | E9S89_RS02390 | Not Available | Negative | 455144 - 455431 | 10946.1 |
| dienelactone hydrolase family protein | E9S89_RS02395 | Not Available | Negative | 455550 - 456437 | 32554.6 |
| l-glyceraldehyde 3-phosphate reductase | E9S89_RS02400 | Not Available | Positive | 456594 - 457634 | 38842.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





