Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 341252 SAMN09457932-rid9462723.guided.102 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1413925 bp
Thymine Count
1399996 bp
Guanine Count
1424723 bp
Cytosine Count
1439242 bp
Genome Length
5697537 bp
Protein-coding Genes
5151 genes
Non-Coding Genes
375 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf945 domain-containing protein | E9S89_RS27725 | Not Available | Negative | 5572627 - 5573130 | 18805.6 |
| tail assembly protein | E9S89_RS27730 | Not Available | Positive | 5573146 - 5573727 | 19973.1 |
| is4-like element isvsa5 family transposase | E9S89_RS27735 | Not Available | Positive | 5574359 - 5575478 | 42772.1 |
| autotransporter adhesin ag43 | E9S89_RS27740 | Not Available | Positive | 5575479 - 5576553 | 37909.7 |
| hypothetical protein | E9S89_RS27745 | Not Available | Positive | 5576726 - 5577625 | 33586.3 |
| serine protease autotransporter espi | E9S89_RS27750 | Not Available | Positive | 5577626 - 5578679 | 36850.8 |
| v-type atpase 116kda subunit family protein | E9S89_RS27755 | Not Available | Positive | 5578680 - 5578823 | 5551.59 |
| is3 family transposase | E9S89_RS27760 | Not Available | Positive | 5578820 - 5579686 | 33542.1 |
| phage lysis protein essd | E9S89_RS27765 | Not Available | Negative | 5579702 - 5579917 | 7806.51 |
| luxr family transcriptional regulator | E9S89_RS27770 | Not Available | Negative | 5580703 - 5581051 | 13698.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





