Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 341252 SAMN09457932-rid9462723.guided.102 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1413925 bp
Thymine Count
1399996 bp
Guanine Count
1424723 bp
Cytosine Count
1439242 bp
Genome Length
5697537 bp
Protein-coding Genes
5151 genes
Non-Coding Genes
375 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| escj/yscj/hrcj family type iii secretion inner membrane ring protein | E9S89_RS25660 | Not Available | Positive | 5245484 - 5246218 | 27576.6 |
| type iii secretion apparatus protein orga/mxik | E9S89_RS25665 | Not Available | Positive | 5246234 - 5246815 | 22782.7 |
| hypothetical protein | E9S89_RS25670 | Not Available | Positive | 5247254 - 5247463 | 8151.46 |
| hypothetical protein | E9S89_RS25680 | Not Available | Positive | 5248486 - 5248743 | 9465.12 |
| fe(3+) dicitrate abc transporter atp-binding protein fece | E9S89_RS25685 | Not Available | Negative | 5249301 - 5250068 | 28192.5 |
| fe(3+) dicitrate abc transporter permease subunit fecd | E9S89_RS25690 | Not Available | Negative | 5250069 - 5251025 | 34152.7 |
| iron-dicitrate abc transporter permease fecc | E9S89_RS25695 | Not Available | Negative | 5251022 - 5252020 | 34864.9 |
| fe(3+) dicitrate abc transporter substrate-binding protein fecb | E9S89_RS25700 | Not Available | Negative | 5252017 - 5252919 | 33122.1 |
| fe(3+) dicitrate transport protein feca | E9S89_RS25705 | Not Available | Negative | 5252964 - 5255288 | 85295.3 |
| fec operon regulator fecr | E9S89_RS25710 | Not Available | Negative | 5255375 - 5256328 | 35534.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





