Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 341252 SAMN09457932-rid9462723.guided.102 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1413925 bp
Thymine Count
1399996 bp
Guanine Count
1424723 bp
Cytosine Count
1439242 bp
Genome Length
5697537 bp
Protein-coding Genes
5151 genes
Non-Coding Genes
375 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| escr/yscr/hrcr family type iii secretion system export apparatus protein | E9S89_RS25605 | Not Available | Positive | 5239752 - 5240417 | 24634.6 |
| escs/yscs/hrcs family type iii secretion system export apparatus protein | E9S89_RS25610 | Not Available | Positive | 5240427 - 5240687 | 9429.87 |
| esct/ysct/hrct family type iii secretion system export apparatus protein | E9S89_RS25615 | Not Available | Positive | 5240689 - 5241456 | 28287.8 |
| flhb hrpn yscu spas family protein | E9S89_RS25620 | Not Available | Positive | 5241465 - 5241926 | 17586.1 |
| histidine kinase | E9S89_RS25625 | Not Available | Positive | 5241937 - 5242197 | 10411.1 |
| flhb hrpn yscu spas family protein | E9S89_RS25630 | Not Available | Positive | 5242194 - 5242586 | 14978.9 |
| invasion protein | E9S89_RS25635 | Not Available | Negative | 5242648 - 5242941 | 11046.2 |
| luxr family transcriptional regulator | E9S89_RS25640 | Not Available | Negative | 5242943 - 5243443 | 19143.0 |
| prgh/eprh family type iii secretion apparatus protein | E9S89_RS25645 | Not Available | Positive | 5243701 - 5244882 | 45248.8 |
| type iii secretion protein | E9S89_RS25655 | Not Available | Positive | 5245228 - 5245443 | 8151.58 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





