Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 341252 SAMN09457932-rid9462723.guided.102 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1413925 bp
Thymine Count
1399996 bp
Guanine Count
1424723 bp
Cytosine Count
1439242 bp
Genome Length
5697537 bp
Protein-coding Genes
5151 genes
Non-Coding Genes
375 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E9S89_RS25495 | Not Available | Positive | 5223049 - 5223252 | 7687.17 |
| hypothetical protein | E9S89_RS25500 | Not Available | Positive | 5224002 - 5224361 | 13633.3 |
| type i toxin-antitoxin system hok family toxin | E9S89_RS25505 | Not Available | Positive | 5224641 - 5224790 | 5543.0 |
| replication regulatory protein repa | E9S89_RS25510 | Not Available | Positive | 5225074 - 5225334 | 10038.3 |
| repa leader peptide tap | E9S89_RS25515 | Not Available | Positive | 5225558 - 5225632 | 2699.38 |
| hypothetical protein | E9S89_RS25520 | Not Available | Positive | 5225625 - 5226019 | 14641.0 |
| d-alanyl-d-alanine dipeptidase | E9S89_RS25525 | Not Available | Positive | 5226205 - 5226786 | 21241.3 |
| abc transporter substrate-binding protein | E9S89_RS25530 | Not Available | Positive | 5226800 - 5228350 | 57612.1 |
| abc transporter permease | E9S89_RS25535 | Not Available | Positive | 5228352 - 5229374 | 37382.3 |
| d,d-dipeptide abc transporter permease | E9S89_RS25540 | Not Available | Positive | 5229371 - 5230267 | 31942.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





