Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 341252 SAMN09457932-rid9462723.guided.102 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1413925 bp
Thymine Count
1399996 bp
Guanine Count
1424723 bp
Cytosine Count
1439242 bp
Genome Length
5697537 bp
Protein-coding Genes
5151 genes
Non-Coding Genes
375 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna pseudouridine(2605) synthase rlub | E9S89_RS22960 | Not Available | Positive | 4774755 - 4775627 | 32599.3 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | E9S89_RS22965 | Not Available | Negative | 4775667 - 4776257 | 22014.2 |
| ycik family oxidoreductase | E9S89_RS22970 | Not Available | Negative | 4776254 - 4777012 | 27961.6 |
| protease sohb | E9S89_RS22975 | Not Available | Positive | 4777232 - 4778281 | 39368.7 |
| ycin family protein | E9S89_RS22980 | Not Available | Negative | 4778317 - 4778568 | 9386.17 |
| type i dna topoisomerase | E9S89_RS22985 | Not Available | Positive | 4778948 - 4781545 | 97355.0 |
| hth-type transcriptional regulator cysb | E9S89_RS22990 | Not Available | Positive | 4781755 - 4782729 | 36152.5 |
| ymia family putative membrane protein | E9S89_RS22995 | Not Available | Positive | 4783024 - 4783188 | 6232.76 |
| hypothetical protein | E9S89_RS23000 | Not Available | Positive | 4783191 - 4783358 | 6338.19 |
| hypothetical protein | E9S89_RS23005 | Not Available | Positive | 4783472 - 4783567 | 3822.77 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





