Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 341252 SAMN09457932-rid9462723.guided.102 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1413925 bp
Thymine Count
1399996 bp
Guanine Count
1424723 bp
Cytosine Count
1439242 bp
Genome Length
5697537 bp
Protein-coding Genes
5151 genes
Non-Coding Genes
375 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yebb family permuted papain-like enzyme | E9S89_RS00855 | Not Available | Negative | 144248 - 144850 | 22607.1 |
| hypothetical protein | E9S89_RS00860 | Not Available | Positive | 144921 - 144986 | 2665.42 |
| holliday junction branch migration protein ruva | E9S89_RS00865 | Not Available | Positive | 145125 - 145736 | 22087.0 |
| holliday junction branch migration dna helicase ruvb | E9S89_RS00870 | Not Available | Positive | 145745 - 146755 | 37176.0 |
| zinc abc transporter permease subunit znub | E9S89_RS00875 | Not Available | Negative | 147096 - 147881 | 27778.5 |
| zinc abc transporter atp-binding protein znuc | E9S89_RS00880 | Not Available | Negative | 147878 - 148633 | 27883.4 |
| zinc abc transporter substrate-binding protein znua | E9S89_RS00885 | Not Available | Positive | 148712 - 149644 | 33851.3 |
| murein dd-endopeptidase mepm | E9S89_RS00890 | Not Available | Positive | 149660 - 150982 | 49060.6 |
| lauroyl-kdo(2)-lipid iv(a) myristoyltransferase | E9S89_RS00895 | Not Available | Positive | 151102 - 152073 | 37412.5 |
| alpha-mannosidase | E9S89_RS00900 | Not Available | Negative | 152162 - 155236 | 117821.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





