Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 341252 SAMN09457932-rid9462723.guided.102 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1413925 bp
Thymine Count
1399996 bp
Guanine Count
1424723 bp
Cytosine Count
1439242 bp
Genome Length
5697537 bp
Protein-coding Genes
5151 genes
Non-Coding Genes
375 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssf | E9S89_RS21765 | Not Available | Positive | 4549617 - 4551467 | 71190.0 |
| type vi secretion system baseplate subunit tssg | E9S89_RS21770 | Not Available | Positive | 4551431 - 4552513 | 40262.1 |
| type vi secretion system-associated fha domain protein tagh | E9S89_RS21775 | Not Available | Positive | 4552538 - 4553818 | 47386.8 |
| type vi secretion system lipoprotein tssj | E9S89_RS21780 | Not Available | Positive | 4553815 - 4554339 | 19395.0 |
| type vi secretion system baseplate subunit tssk | E9S89_RS21785 | Not Available | Positive | 4554342 - 4555673 | 49898.7 |
| dotu family type iv/vi secretion system protein | E9S89_RS21790 | Not Available | Positive | 4555678 - 4556439 | 29350.7 |
| type vi secretion system atpase tssh | E9S89_RS21795 | Not Available | Positive | 4556448 - 4559213 | 100997.0 |
| type vi secretion system-associated protein tago | E9S89_RS21800 | Not Available | Positive | 4559210 - 4559953 | 26442.7 |
| type vi secretion system protein tssa | E9S89_RS21805 | Not Available | Positive | 4559958 - 4561370 | 52320.1 |
| type vi secretion system membrane subunit tssm | E9S89_RS21810 | Not Available | Positive | 4561479 - 4564913 | 130821.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





