Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 341252 SAMN09457932-rid9462723.guided.102 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1413925 bp
Thymine Count
1399996 bp
Guanine Count
1424723 bp
Cytosine Count
1439242 bp
Genome Length
5697537 bp
Protein-coding Genes
5151 genes
Non-Coding Genes
375 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l23 | E9S89_RS21465 | Not Available | Negative | 4491026 - 4491328 | 11199.8 |
| 50s ribosomal protein l4 | E9S89_RS21470 | Not Available | Negative | 4491325 - 4491930 | 22087.8 |
| 50s ribosomal protein l3 | E9S89_RS21475 | Not Available | Negative | 4491941 - 4492570 | 22244.8 |
| 30s ribosomal protein s10 | E9S89_RS21480 | Not Available | Negative | 4492603 - 4492914 | 11736.3 |
| putative general secretion pathway protein gspb | E9S89_RS21485 | Not Available | Negative | 4493152 - 4493571 | 15862.8 |
| type ii secretion system protein gspa | E9S89_RS21490 | Not Available | Negative | 4493573 - 4495042 | 55301.1 |
| type ii secretion system protein gspc | E9S89_RS21495 | Not Available | Positive | 4495222 - 4496037 | 30039.9 |
| type ii secretion system secretin gspd | E9S89_RS21500 | Not Available | Positive | 4496021 - 4497973 | 70683.2 |
| type ii secretion system atpase gspe | E9S89_RS21505 | Not Available | Positive | 4497983 - 4499464 | 54599.9 |
| type ii secretion system inner membrane protein gspf | E9S89_RS21510 | Not Available | Positive | 4499461 - 4500657 | 44341.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





