Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 341252 SAMN09457932-rid9462723.guided.102 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1413925 bp
Thymine Count
1399996 bp
Guanine Count
1424723 bp
Cytosine Count
1439242 bp
Genome Length
5697537 bp
Protein-coding Genes
5151 genes
Non-Coding Genes
375 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E9S89_RS20645 | Not Available | Positive | 4341423 - 4341728 | 11010.6 |
| type iv secretion system protein virb3 | E9S89_RS20650 | Not Available | Positive | 4341784 - 4342107 | 11784.2 |
| type iv secretion system protein virb4 | E9S89_RS20655 | Not Available | Positive | 4342109 - 4344544 | 92452.8 |
| hypothetical protein | E9S89_RS20660 | Not Available | Positive | 4345230 - 4345898 | 25108.0 |
| hypothetical protein | E9S89_RS20665 | Not Available | Positive | 4345992 - 4346339 | 13124.5 |
| type iv secretion system protein | E9S89_RS20670 | Not Available | Positive | 4346405 - 4347448 | 37750.2 |
| type iv secretion system protein | E9S89_RS20675 | Not Available | Positive | 4347649 - 4348395 | 28292.0 |
| trbg/virb9 family p-type conjugative transfer protein | E9S89_RS20680 | Not Available | Positive | 4348392 - 4349189 | 29695.9 |
| trbi/virb10 family protein | E9S89_RS20685 | Not Available | Positive | 4349179 - 4350402 | 43943.3 |
| p-type dna transfer atpase virb11 | E9S89_RS20690 | Not Available | Positive | 4350402 - 4351415 | 37826.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





