Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 341252 SAMN09457932-rid9462723.guided.102 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1413925 bp
Thymine Count
1399996 bp
Guanine Count
1424723 bp
Cytosine Count
1439242 bp
Genome Length
5697537 bp
Protein-coding Genes
5151 genes
Non-Coding Genes
375 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hcp family type vi secretion system effector | E9S89_RS20545 | Not Available | Negative | 4324851 - 4325342 | 18737.0 |
| ompa family protein | E9S89_RS20550 | Not Available | Negative | 4325377 - 4327077 | 63569.0 |
| dotu family type iv/vi secretion system protein | E9S89_RS20555 | Not Available | Negative | 4327080 - 4327733 | 24539.3 |
| type vi secretion system baseplate subunit tssk | E9S89_RS20560 | Not Available | Negative | 4327730 - 4329067 | 49876.0 |
| type vi secretion system contractile sheath large subunit | E9S89_RS20565 | Not Available | Negative | 4329083 - 4330627 | 57710.6 |
| type vi secretion system contractile sheath small subunit | E9S89_RS20570 | Not Available | Negative | 4330648 - 4331145 | 18498.3 |
| duf4222 domain-containing protein | E9S89_RS20575 | Not Available | Positive | 4331644 - 4331853 | 7970.58 |
| hypothetical protein | E9S89_RS20580 | Not Available | Negative | 4331873 - 4332106 | 8877.04 |
| dna-binding protein | E9S89_RS20585 | Not Available | Negative | 4332195 - 4332818 | 23893.7 |
| hypothetical protein | E9S89_RS20590 | Not Available | Negative | 4333124 - 4333537 | 15454.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





