Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 341252 SAMN09457932-rid9462723.guided.102 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1413925 bp
Thymine Count
1399996 bp
Guanine Count
1424723 bp
Cytosine Count
1439242 bp
Genome Length
5697537 bp
Protein-coding Genes
5151 genes
Non-Coding Genes
375 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator galr | E9S89_RS20080 | Not Available | Positive | 4227167 - 4228198 | 37140.3 |
| diaminopimelate decarboxylase | E9S89_RS20085 | Not Available | Negative | 4228205 - 4229467 | 46180.0 |
| dna-binding transcriptional regulator lysr | E9S89_RS20090 | Not Available | Positive | 4229589 - 4230524 | 34424.7 |
| amino acid racemase | E9S89_RS20095 | Not Available | Negative | 4230511 - 4231203 | 25309.5 |
| sugar porter family mfs transporter | E9S89_RS20100 | Not Available | Negative | 4231332 - 4232750 | 51687.6 |
| 2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase kdud | E9S89_RS20105 | Not Available | Negative | 4233065 - 4233826 | 27043.6 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | E9S89_RS20110 | Not Available | Negative | 4233856 - 4234692 | 31078.1 |
| acetyl-coa c-acetyltransferase | E9S89_RS20115 | Not Available | Negative | 4234979 - 4236160 | 41037.2 |
| haaap family serine/threonine permease | E9S89_RS20120 | Not Available | Positive | 4236415 - 4237644 | 45101.9 |
| helix-turn-helix transcriptional regulator | E9S89_RS20125 | Not Available | Positive | 4238104 - 4238736 | 24444.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





