Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 341252 SAMN09457932-rid9462723.guided.102 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1413925 bp
Thymine Count
1399996 bp
Guanine Count
1424723 bp
Cytosine Count
1439242 bp
Genome Length
5697537 bp
Protein-coding Genes
5151 genes
Non-Coding Genes
375 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| autoinducer 2 abc transporter permease lsrc | E9S89_RS19875 | Not Available | Negative | 4169903 - 4170931 | 36403.0 |
| autoinducer 2 abc transporter atp-binding protein lsra | E9S89_RS19880 | Not Available | Negative | 4170925 - 4172448 | 55214.0 |
| transcriptional regulator lsrr | E9S89_RS19885 | Not Available | Positive | 4172697 - 4173650 | 33816.0 |
| autotransporter barrel domain-containing lipoprotein | E9S89_RS19890 | Not Available | Positive | 4173729 - 4178387 | 163353.0 |
| type ii toxin-antitoxin system antitoxin hipb | E9S89_RS19895 | Not Available | Positive | 4178596 - 4178862 | 10047.9 |
| type ii toxin-antitoxin system serine/threonine protein kinase toxin hipa | E9S89_RS19900 | Not Available | Positive | 4178862 - 4180184 | 49407.9 |
| fimbrial protein | E9S89_RS19910 | Not Available | Positive | 4181136 - 4181654 | 17448.7 |
| fimbrial biogenesis outer membrane usher protein | E9S89_RS19915 | Not Available | Positive | 4181596 - 4183137 | 56138.1 |
| type 1 fimbrial protein | E9S89_RS19920 | Not Available | Positive | 4183151 - 4183681 | 18921.6 |
| type 1 fimbrial protein | E9S89_RS19925 | Not Available | Positive | 4183694 - 4184197 | 18233.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





