Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 341252 SAMN09457932-rid9462723.guided.102 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1413925 bp
Thymine Count
1399996 bp
Guanine Count
1424723 bp
Cytosine Count
1439242 bp
Genome Length
5697537 bp
Protein-coding Genes
5151 genes
Non-Coding Genes
375 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system rele/pare family toxin | E9S89_RS19475 | Not Available | Negative | 4098115 - 4098402 | 11105.8 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | E9S89_RS19480 | Not Available | Negative | 4098399 - 4098650 | 9211.91 |
| hypothetical protein | E9S89_RS19485 | Not Available | Negative | 4098723 - 4098914 | 6814.49 |
| incfii family plasmid replication initiator repa | E9S89_RS19490 | Not Available | Negative | 4099609 - 4100472 | 32889.7 |
| hypothetical protein | E9S89_RS19495 | Not Available | Negative | 4100518 - 4100706 | 6793.86 |
| transcription termination factor nusg | E9S89_RS19500 | Not Available | Positive | 4101183 - 4101824 | 24657.9 |
| trac | E9S89_RS19505 | Not Available | Positive | 4101965 - 4102630 | 24903.8 |
| yqij family protein | E9S89_RS19510 | Not Available | Positive | 4102897 - 4103517 | 22314.8 |
| flotillin family protein | E9S89_RS19515 | Not Available | Positive | 4103544 - 4105238 | 61868.4 |
| pili type iv pilus biogenesis protein | E9S89_RS19520 | Not Available | Positive | 4105244 - 4105561 | 12328.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





