Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 341252 SAMN09457932-rid9462723.guided.102 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1413925 bp
Thymine Count
1399996 bp
Guanine Count
1424723 bp
Cytosine Count
1439242 bp
Genome Length
5697537 bp
Protein-coding Genes
5151 genes
Non-Coding Genes
375 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf957 domain-containing protein | E9S89_RS16505 | Not Available | Negative | 3484638 - 3484764 | 4732.53 |
| hypothetical protein | E9S89_RS16510 | Not Available | Positive | 3484765 - 3485563 | 30312.7 |
| recombination protein rect | E9S89_RS16515 | Not Available | Positive | 3485556 - 3486365 | 29722.8 |
| type i toxin-antitoxin system endodeoxyribonuclease toxin ralr | E9S89_RS16520 | Not Available | Positive | 3486422 - 3486616 | 7019.25 |
| double-strand break reduction protein rcba | E9S89_RS16525 | Not Available | Positive | 3486609 - 3486818 | 7863.49 |
| excisionase xisr | E9S89_RS16530 | Not Available | Positive | 3486897 - 3487112 | 8456.25 |
| site-specific integrase | E9S89_RS16535 | Not Available | Positive | 3487114 - 3488349 | 47472.6 |
| trna 2-thiocytidine(32) synthetase ttca | E9S89_RS16540 | Not Available | Positive | 3488401 - 3489336 | 35529.9 |
| atp-dependent rna helicase dbpa | E9S89_RS16545 | Not Available | Negative | 3489465 - 3490838 | 49214.7 |
| zinc transporter zntb | E9S89_RS16550 | Not Available | Negative | 3491316 - 3492299 | 36628.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





