Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 341252 SAMN09457932-rid9462723.guided.102 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1413925 bp
Thymine Count
1399996 bp
Guanine Count
1424723 bp
Cytosine Count
1439242 bp
Genome Length
5697537 bp
Protein-coding Genes
5151 genes
Non-Coding Genes
375 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fucose-proton symporter | E9S89_RS13445 | Not Available | Positive | 2855454 - 2856770 | 47547.6 |
| l-fucose isomerase | E9S89_RS13450 | Not Available | Positive | 2856803 - 2858578 | 64980.3 |
| l-fuculokinase | E9S89_RS13455 | Not Available | Positive | 2858687 - 2860105 | 52219.6 |
| l-fucose mutarotase | E9S89_RS13460 | Not Available | Positive | 2860107 - 2860529 | 15474.0 |
| l-fucose operon activator | E9S89_RS13465 | Not Available | Positive | 2860587 - 2861318 | 27363.7 |
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | E9S89_RS13470 | Not Available | Negative | 2861362 - 2862462 | 41907.5 |
| duf423 domain-containing protein | E9S89_RS13475 | Not Available | Negative | 2862455 - 2862850 | 14334.0 |
| transcriptional regulator gcva | E9S89_RS13480 | Not Available | Negative | 2862869 - 2863786 | 34403.4 |
| ygdi/ygdr family lipoprotein | E9S89_RS13485 | Not Available | Negative | 2864137 - 2864364 | 8174.67 |
| cysteine desulfurase csda | E9S89_RS13490 | Not Available | Positive | 2864556 - 2865761 | 43278.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





