Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 341252 SAMN09457932-rid9462723.guided.102 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1413925 bp
Thymine Count
1399996 bp
Guanine Count
1424723 bp
Cytosine Count
1439242 bp
Genome Length
5697537 bp
Protein-coding Genes
5151 genes
Non-Coding Genes
375 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cu(+)/ag(+) efflux rnd transporter outer membrane channel cusc | E9S89_RS12815 | Not Available | Negative | 2725491 - 2726870 | 50586.8 |
| copper response regulator transcription factor cusr | E9S89_RS12820 | Not Available | Positive | 2727027 - 2727710 | 25396.1 |
| cu(+)/ag(+) sensor histidine kinase cuss | E9S89_RS12825 | Not Available | Positive | 2727700 - 2729148 | 54063.5 |
| type vi secretion system tip protein vgrg | E9S89_RS12830 | Not Available | Positive | 2729885 - 2731786 | 71412.0 |
| dcrb-related protein | E9S89_RS12835 | Not Available | Positive | 2731814 - 2732275 | 17319.4 |
| type iv secretion protein rhs | E9S89_RS12845 | Not Available | Positive | 2733408 - 2734175 | 29185.0 |
| rhs repeat protein | E9S89_RS12865 | Not Available | Positive | 2735823 - 2737157 | 50583.5 |
| hypothetical protein | E9S89_RS12870 | Not Available | Positive | 2737196 - 2737405 | 7953.64 |
| type iv secretion protein rhs | E9S89_RS12875 | Not Available | Positive | 2737520 - 2737831 | 12207.7 |
| Trna-arg | Not Available | Not Available | Positive | 2737894 - 2737970 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





