Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 341252 SAMN09457932-rid9462723.guided.102 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1413925 bp
Thymine Count
1399996 bp
Guanine Count
1424723 bp
Cytosine Count
1439242 bp
Genome Length
5697537 bp
Protein-coding Genes
5151 genes
Non-Coding Genes
375 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E9S89_RS11810 | Not Available | Negative | 2506537 - 2506818 | 10304.0 |
| c-di-gmp phosphodiesterase pdec | E9S89_RS11815 | Not Available | Positive | 2507248 - 2508834 | 60790.8 |
| superoxide response transcriptional regulator soxs | E9S89_RS11820 | Not Available | Negative | 2508837 - 2509160 | 12911.6 |
| redox-sensitive transcriptional activator soxr | E9S89_RS11825 | Not Available | Positive | 2509246 - 2509710 | 17150.7 |
| ncs2 family permease | E9S89_RS11830 | Not Available | Positive | 2510255 - 2511604 | 45714.4 |
| na+/h+ antiporter | E9S89_RS11835 | Not Available | Positive | 2511756 - 2513405 | 60527.5 |
| pentapeptide repeat-containing protein | E9S89_RS11840 | Not Available | Negative | 2513559 - 2514851 | 49215.9 |
| cation/acetate symporter actp | E9S89_RS11845 | Not Available | Negative | 2515029 - 2516678 | 59186.7 |
| duf485 domain-containing protein | E9S89_RS11850 | Not Available | Negative | 2516675 - 2516989 | 11672.3 |
| acetate--coa ligase | E9S89_RS11855 | Not Available | Negative | 2517190 - 2519148 | 72097.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





