Escherichia coli strain 341252 SAMN09457932-rid9462723.guided.102

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain 341252 (SAMN09457932-rid9462723.guided.102) is a Gram-negative, rod-shaped bacterium that exhibits mobility due to the presence of flagella. This strain is classified as a facultative anaerobe, allowing it to thrive in both aerobic and anaerobic environments. It is typically found in host-associated habitats, with Homo sapiens and various animal species, such as Gallus gallus (chickens), Bos taurus (cattle), and Sus scrofa (pigs), serving as hosts. The optimal growth temperature for this strain is 37°C, categorizing it as mesophilic, and it possesses a single replicon and a bipartite membrane structure. E. coli strain 341252 is known to have significant implications for human health, being associated with a range of conditions including urinary tract infections (UTIs), gastrointestinal infections, and neonatal meningitis. The health impacts extend to severe outcomes such as septicemia and hemolytic uremic syndrome (HUS), demonstrating its pathogenic potential. Additionally, this strain is implicated in various diseases affecting both humans and animals, highlighting its ecological versatility and the potential for zoonotic transmission. Its ability to cause infections across a diverse array of hosts underscores the importance of surveillance and control measures in minimizing the risks associated with E. coli infections. The strain's presence in numerous animal species suggests it plays a significant role in both environmental and clinical contexts, warranting further research into its pathogenic mechanisms and ecological interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain 341252 SAMN09457932-rid9462723.guided.102

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain 341252 SAMN09457932-rid9462723.guided.102
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain 341252 SAMN09457932-rid9462723.guided.102,

Gene Summary

Adenine Count

1413925 bp

Thymine Count

1399996 bp

Guanine Count

1424723 bp

Cytosine Count

1439242 bp

Genome Length

5697537 bp

Protein-coding Genes

5151 genes

Non-Coding Genes

375 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna(met) cytidine acetyltransferaseE9S89_RS10310Not AvailablePositive2173598 - 217561374736.5
esteraseE9S89_RS10315Not AvailablePositive2175687 - 217638524829.4
ypfn family proteinE9S89_RS10320Not AvailableNegative2176495 - 21766958071.78
succinyl-diaminopimelate desuccinylaseE9S89_RS10325Not AvailableNegative2176723 - 217785041271.4
arsc family reductaseE9S89_RS10330Not AvailableNegative2177854 - 217821013515.2
protein ypfmE9S89_RS10335Not AvailablePositive2178591 - 21786502408.02
multidrug efflux rnd transporter permease acrdE9S89_RS10340Not AvailableNegative2178749 - 2181862113098.0
nitrate/nitrite two-component system sensor histidine kinase narqE9S89_RS10345Not AvailableNegative2182026 - 218372663630.6
formate-dependent uric acid utilization protein aegaE9S89_RS10350Not AvailablePositive2183932 - 218591171876.1
gdp-mannose pyrophosphatase nudkE9S89_RS10355Not AvailablePositive2185979 - 218655421733.9

Displaying genes 2251 – 2260 of 5534 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total