Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 341252 SAMN09457932-rid9462723.guided.102 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1413925 bp
Thymine Count
1399996 bp
Guanine Count
1424723 bp
Cytosine Count
1439242 bp
Genome Length
5697537 bp
Protein-coding Genes
5151 genes
Non-Coding Genes
375 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase 4 subunit hyfc | E9S89_RS10255 | Not Available | Negative | 2163906 - 2164853 | 34387.4 |
| hydrogenase 4 subunit hyfa | E9S89_RS10265 | Not Available | Negative | 2166881 - 2167498 | 22234.6 |
| thioredoxin-dependent thiol peroxidase | E9S89_RS10270 | Not Available | Negative | 2167751 - 2168221 | 17634.9 |
| glycine cleavage system transcriptional repressor | E9S89_RS10275 | Not Available | Negative | 2168221 - 2168793 | 20769.8 |
| 4-hydroxy-tetrahydrodipicolinate synthase | E9S89_RS10280 | Not Available | Positive | 2168939 - 2169817 | 31285.9 |
| outer membrane protein assembly factor bamc | E9S89_RS10285 | Not Available | Positive | 2169834 - 2170868 | 36844.5 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | E9S89_RS10290 | Not Available | Positive | 2171081 - 2171794 | 26996.5 |
| toxin-antitoxin system antitoxin vapb | E9S89_RS10295 | Not Available | Positive | 2171948 - 2172175 | 8499.05 |
| trna(fmet)-specific endonuclease vapc | E9S89_RS10300 | Not Available | Positive | 2172175 - 2172573 | 14895.2 |
| neutral zinc metallopeptidase | E9S89_RS10305 | Not Available | Positive | 2172720 - 2173583 | 31489.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





