Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 341252 SAMN09457932-rid9462723.guided.102 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1413925 bp
Thymine Count
1399996 bp
Guanine Count
1424723 bp
Cytosine Count
1439242 bp
Genome Length
5697537 bp
Protein-coding Genes
5151 genes
Non-Coding Genes
375 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-4-amino-4-deoxy-l-arabinose aminotransferase | E9S89_RS09075 | Not Available | Positive | 1902172 - 1903311 | 41662.2 |
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | E9S89_RS09080 | Not Available | Positive | 1903315 - 1904283 | 36341.3 |
| bifunctional udp-glucuronic acid oxidase/udp-4-amino-4-deoxy-l-arabinose formyltransferase | E9S89_RS09085 | Not Available | Positive | 1904283 - 1906265 | 74242.0 |
| 4-deoxy-4-formamido-l-arabinose- phosphoundecaprenol deformylase | E9S89_RS09090 | Not Available | Positive | 1906262 - 1907152 | 33113.6 |
| lipid iv(a) 4-amino-4-deoxy-l-arabinosyltransferase | E9S89_RS09095 | Not Available | Positive | 1907152 - 1908804 | 62561.9 |
| 4-amino-4-deoxy-l-arabinose-phosphoundecaprenol flippase subunit arne | E9S89_RS09100 | Not Available | Positive | 1908801 - 1909136 | 12192.7 |
| 4-amino-4-deoxy-l-arabinose-phosphoundecaprenol flippase subunit arnf | E9S89_RS09105 | Not Available | Positive | 1909136 - 1909522 | 14116.1 |
| signal transduction protein pmrd | E9S89_RS09110 | Not Available | Negative | 1909516 - 1909782 | 9871.03 |
| o-succinylbenzoate--coa ligase | E9S89_RS09115 | Not Available | Negative | 1909892 - 1911247 | 50118.3 |
| o-succinylbenzoate synthase | E9S89_RS09120 | Not Available | Negative | 1911244 - 1912206 | 35464.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





