Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 341252 SAMN09457932-rid9462723.guided.102 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1413925 bp
Thymine Count
1399996 bp
Guanine Count
1424723 bp
Cytosine Count
1439242 bp
Genome Length
5697537 bp
Protein-coding Genes
5151 genes
Non-Coding Genes
375 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate decarboxylase | E9S89_RS08760 | Not Available | Negative | 1809597 - 1810997 | 52688.0 |
| cytochrome c peroxidase | E9S89_RS08765 | Not Available | Negative | 1811208 - 1812605 | 51543.3 |
| alpha,alpha-trehalase tref | E9S89_RS08770 | Not Available | Positive | 1813010 - 1814659 | 63718.1 |
| response regulator transcription factor | E9S89_RS08775 | Not Available | Negative | 1814710 - 1815312 | 22605.6 |
| lysr family transcriptional regulator | E9S89_RS08780 | Not Available | Positive | 1815760 - 1816731 | 36039.9 |
| inner membrane protein yhjd | E9S89_RS08785 | Not Available | Positive | 1816780 - 1817793 | 37902.6 |
| mhs family mfs transporter | E9S89_RS08790 | Not Available | Positive | 1818204 - 1819526 | 47180.9 |
| asma family protein | E9S89_RS08795 | Not Available | Negative | 1819760 - 1821820 | 74461.8 |
| cyclic-guanylate-specific phosphodiesterase | E9S89_RS08800 | Not Available | Negative | 1821890 - 1822657 | 29572.9 |
| 2-dehydro-3-deoxygluconokinase | E9S89_RS08805 | Not Available | Positive | 1822889 - 1823818 | 33963.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





