Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 341252 SAMN09457932-rid9462723.guided.102 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1413925 bp
Thymine Count
1399996 bp
Guanine Count
1424723 bp
Cytosine Count
1439242 bp
Genome Length
5697537 bp
Protein-coding Genes
5151 genes
Non-Coding Genes
375 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | E9S89_RS07680 | Not Available | Positive | 1580651 - 1581337 | 24534.5 |
| abc transporter permease | E9S89_RS07685 | Not Available | Positive | 1581334 - 1583748 | 89346.5 |
| trna 2-selenouridine(34) synthase mnmh | E9S89_RS07690 | Not Available | Negative | 1584460 - 1585554 | 41299.5 |
| ureidoglycolate lyase | E9S89_RS07700 | Not Available | Positive | 1586779 - 1587261 | 18223.6 |
| hth-type transcriptional repressor allr | E9S89_RS07705 | Not Available | Positive | 1587339 - 1588154 | 29271.4 |
| glyoxylate carboligase | E9S89_RS07710 | Not Available | Positive | 1588244 - 1590025 | 64735.5 |
| hydroxypyruvate isomerase | E9S89_RS07715 | Not Available | Positive | 1590038 - 1590814 | 29370.1 |
| 2-hydroxy-3-oxopropionate reductase | E9S89_RS07720 | Not Available | Positive | 1590914 - 1591792 | 30802.5 |
| putative allantoin permease | E9S89_RS07725 | Not Available | Positive | 1591961 - 1593415 | 52449.2 |
| allantoinase allb | E9S89_RS07730 | Not Available | Positive | 1593475 - 1594836 | 49588.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





