Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 341252 SAMN09457932-rid9462723.guided.102 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1413925 bp
Thymine Count
1399996 bp
Guanine Count
1424723 bp
Cytosine Count
1439242 bp
Genome Length
5697537 bp
Protein-coding Genes
5151 genes
Non-Coding Genes
375 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-ribulose-5-phosphate 4-epimerase | E9S89_RS05840 | Not Available | Positive | 1205647 - 1206342 | 25447.3 |
| dna polymerase ii | E9S89_RS05845 | Not Available | Positive | 1206417 - 1208768 | 90026.6 |
| rna polymerase-associated protein rapa | E9S89_RS05850 | Not Available | Positive | 1208933 - 1211839 | 109791.0 |
| bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rlua | E9S89_RS05855 | Not Available | Positive | 1211851 - 1212510 | 24862.1 |
| co-chaperone djla | E9S89_RS05860 | Not Available | Negative | 1212627 - 1213442 | 30581.2 |
| lps assembly protein lptd | E9S89_RS05865 | Not Available | Positive | 1213697 - 1216051 | 89661.8 |
| peptidylprolyl isomerase sura | E9S89_RS05870 | Not Available | Positive | 1216104 - 1217390 | 47260.5 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | E9S89_RS05875 | Not Available | Positive | 1217390 - 1218379 | 35184.9 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | E9S89_RS05880 | Not Available | Positive | 1218376 - 1219197 | 30422.0 |
| co2+/mg2+ efflux protein apag | E9S89_RS05885 | Not Available | Positive | 1219200 - 1219577 | 13867.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





