Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 341252 SAMN09457932-rid9462723.guided.102 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1413925 bp
Thymine Count
1399996 bp
Guanine Count
1424723 bp
Cytosine Count
1439242 bp
Genome Length
5697537 bp
Protein-coding Genes
5151 genes
Non-Coding Genes
375 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| poly-beta-1,6-n-acetyl-d-glucosamine n-deacetylase pgab | E9S89_RS05135 | Not Available | Negative | 1043707 - 1045725 | 77388.8 |
| poly-beta-1,6 n-acetyl-d-glucosamine export porin pgaa | E9S89_RS05140 | Not Available | Negative | 1045734 - 1048157 | 92279.0 |
| ggdef domain-containing protein | E9S89_RS05145 | Not Available | Positive | 1048744 - 1050102 | 51800.5 |
| d-glycero-beta-d-manno-heptose 1,7-bisphosphate 7-phosphatase | E9S89_RS05150 | Not Available | Negative | 1050169 - 1050741 | 21167.3 |
| methionine abc transporter atp-binding protein metn | E9S89_RS05155 | Not Available | Positive | 1050929 - 1051960 | 37804.7 |
| methionine abc transporter permease meti | E9S89_RS05160 | Not Available | Positive | 1051953 - 1052606 | 23257.6 |
| methionine abc transporter substrate-binding lipoprotein metq | E9S89_RS05165 | Not Available | Positive | 1052646 - 1053461 | 29419.2 |
| rcs stress response system protein rcsf | E9S89_RS05170 | Not Available | Positive | 1053579 - 1053983 | 14164.3 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | E9S89_RS05175 | Not Available | Positive | 1053980 - 1054687 | 26393.9 |
| proline--trna ligase | E9S89_RS05180 | Not Available | Positive | 1054798 - 1056516 | 63670.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





