Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 341252 SAMN09457932-rid9462723.guided.102 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1413925 bp
Thymine Count
1399996 bp
Guanine Count
1424723 bp
Cytosine Count
1439242 bp
Genome Length
5697537 bp
Protein-coding Genes
5151 genes
Non-Coding Genes
375 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s12 methylthiotransferase accessory protein ycao | E9S89_RS04535 | Not Available | Negative | 911569 - 913329 | 65669.0 |
| duf421 domain-containing protein | E9S89_RS04540 | Not Available | Positive | 913459 - 914151 | 26283.5 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | E9S89_RS04545 | Not Available | Positive | 914350 - 915438 | 39900.6 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | E9S89_RS04550 | Not Available | Positive | 915509 - 916792 | 46098.5 |
| m48 family metallopeptidase | E9S89_RS04555 | Not Available | Positive | 916961 - 917725 | 26768.7 |
| (d)cmp kinase | E9S89_RS04560 | Not Available | Positive | 917898 - 918581 | 24747.8 |
| 30s ribosomal protein s1 | E9S89_RS04565 | Not Available | Positive | 918692 - 920365 | 61161.5 |
| integration host factor subunit beta | E9S89_RS04570 | Not Available | Positive | 920525 - 920809 | 10651.8 |
| comec family protein | E9S89_RS04575 | Not Available | Positive | 921016 - 923280 | 84573.0 |
| lipid a abc transporter atp-binding protein/permease msba | E9S89_RS04580 | Not Available | Positive | 923317 - 925065 | 64464.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





