Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 341252 SAMN09457932-rid9462723.guided.102 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1413925 bp
Thymine Count
1399996 bp
Guanine Count
1424723 bp
Cytosine Count
1439242 bp
Genome Length
5697537 bp
Protein-coding Genes
5151 genes
Non-Coding Genes
375 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| secretion protein hlyd | E9S89_RS03980 | Not Available | Negative | 785549 - 786547 | 36399.9 |
| dna-binding transcriptional regulator cecr | E9S89_RS03985 | Not Available | Negative | 786547 - 787218 | 25002.1 |
| atp-dependent rna helicase rhle | E9S89_RS03990 | Not Available | Positive | 787447 - 788811 | 49992.4 |
| n-glycosidase ybia | E9S89_RS03995 | Not Available | Negative | 789043 - 789525 | 18647.3 |
| atp-dependent dna helicase ding | E9S89_RS04000 | Not Available | Positive | 789645 - 791795 | 81475.0 |
| dna-binding protein ybib | E9S89_RS04005 | Not Available | Positive | 791823 - 792785 | 35050.7 |
| malate/lactate/ureidoglycolate dehydrogenase | E9S89_RS04010 | Not Available | Positive | 792926 - 794011 | 38899.3 |
| duf1471 domain-containing protein | E9S89_RS04015 | Not Available | Negative | 794240 - 794500 | 8568.2 |
| c4-type zinc finger protein ybii | E9S89_RS04020 | Not Available | Negative | 794765 - 795031 | 9756.33 |
| pkhd-type hydroxylase ybix | E9S89_RS04025 | Not Available | Negative | 795105 - 795782 | 25530.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





