Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative tail fiber protein | D4M06_RS02370 | Not Available | Positive | 531986 - 533302 | 44394.4 |
| Tail fiber protein | D4M06_RS02375 | Not Available | Positive | 533304 - 533573 | 9888.06 |
| Hypothetical protein | D4M06_RS02380 | Not Available | Positive | 533750 - 534730 | 38058.2 |
| type iii secretion system effector zinc metalloprotease nlec | D4M06_RS02385 | Not Available | Positive | 534764 - 535783 | 38258.2 |
| hypothetical | D4M06_RS02390 | Not Available | Negative | 535903 - 536007 | 3973.59 |
| Tail fiber assembly protein | D4M06_RS02395 | Not Available | Positive | 536280 - 536441 | 5858.94 |
| Hypothetical protein | D4M06_RS02400 | Not Available | Positive | 536611 - 537492 | 32392.1 |
| hypothetical | D4M06_RS02405 | Not Available | Positive | 537540 - 537661 | 4388.53 |
| t3ss effector zinc metalloprotease nled | D4M06_RS02410 | Not Available | Positive | 537723 - 538421 | 25962.6 |
| Tail fibrer protein gps | D4M06_RS14660 | Not Available | Negative | 3183683 - 3185038 | 46690.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




