Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Head size determination protein sid | D4M06_RS16490 | Not Available | Negative | 3527894 - 3528628 | 27266.3 |
| Transcriptional regulator | D4M06_RS16495 | Not Available | Positive | 3529180 - 3529446 | 9763.97 |
| Putative ci repressor | D4M06_RS16500 | Not Available | Positive | 3529443 - 3530033 | 21426.2 |
| Helper derepression protein | D4M06_RS16505 | Not Available | Positive | 3530026 - 3530313 | 10937.0 |
| Hypothetical protein | D4M06_RS16510 | Not Available | Positive | 3530306 - 3530761 | 17748.3 |
| Hypothetical protein | D4M06_RS16515 | Not Available | Positive | 3530897 - 3531217 | 11802.6 |
| Dna primase | D4M06_RS16520 | Not Available | Positive | 3531232 - 3533565 | 84811.1 |
| Attr | Not Available | Not Available | Positive | 3534051 - 3534064 | Not Available |
| Mu-like prophage flumu dna-binding protein ner | D4M06_RS16695 | Not Available | Positive | 3575157 - 3575405 | 9416.4 |
| Phage transposase | D4M06_RS16700 | Not Available | Positive | 3575407 - 3577497 | 79727.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




