Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D4M06_RS03025 | Not Available | Positive | 666579 - 666821 | 8717.32 |
| duf4222 domain-containing protein | D4M06_RS03030 | Not Available | Positive | 666827 - 667126 | 11584.2 |
| dna primase | D4M06_RS03035 | Not Available | Positive | 667123 - 668871 | 64449.2 |
| hypothetical protein | D4M06_RS03040 | Not Available | Positive | 669222 - 669467 | 9193.03 |
| hypothetical protein | D4M06_RS03045 | Not Available | Positive | 669598 - 669792 | 7189.86 |
| antitermination protein nusg | D4M06_RS03050 | Not Available | Positive | 669796 - 669957 | 5869.12 |
| terminase small subunit | D4M06_RS03055 | Not Available | Positive | 670087 - 670575 | 17947.9 |
| phage major capsid protein | D4M06_RS03060 | Not Available | Positive | 670738 - 671661 | 33357.4 |
| atp-dependent clp protease adapter clps | D4M06_RS03065 | Not Available | Positive | 672640 - 672960 | 12179.7 |
| atp-dependent clp protease atp-binding subunit clpa | D4M06_RS03070 | Not Available | Positive | 672991 - 675267 | 84211.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




