Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf535 domain-containing protein | D4M06_RS02975 | Not Available | Negative | 658325 - 659281 | 36941.0 |
| macrolide transporter subunit maca | D4M06_RS02980 | Not Available | Positive | 659432 - 660547 | 40641.4 |
| macrolide abc transporter atp-binding protein/permease macb | D4M06_RS02985 | Not Available | Positive | 660544 - 662490 | 70708.9 |
| cold shock-like protein cspd | D4M06_RS02990 | Not Available | Negative | 662563 - 662787 | 7969.41 |
| site-specific integrase | D4M06_RS02995 | Not Available | Positive | 663192 - 664415 | 46792.7 |
| hypothetical protein | D4M06_RS03000 | Not Available | Positive | 664412 - 665185 | 29222.8 |
| alpa family phage regulatory protein | D4M06_RS03005 | Not Available | Positive | 665277 - 665501 | 8591.23 |
| hypothetical protein | D4M06_RS03010 | Not Available | Negative | 665636 - 665815 | 6627.9 |
| host cell division inhibitor icd-like protein | D4M06_RS03015 | Not Available | Positive | 666015 - 666218 | 7605.12 |
| hypothetical protein | D4M06_RS03020 | Not Available | Positive | 666211 - 666447 | 8190.97 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




