Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylmuramoyl-l-alanine amidase | D4M06_RS02925 | Not Available | Positive | 645147 - 645977 | 31068.2 |
| nad(p)-dependent oxidoreductase | D4M06_RS02930 | Not Available | Negative | 645974 - 646987 | 38087.9 |
| sdr family oxidoreductase | D4M06_RS02935 | Not Available | Negative | 647086 - 648516 | 53926.4 |
| low-specificity l-threonine aldolase | D4M06_RS02940 | Not Available | Negative | 648527 - 649528 | 36484.8 |
| ubiquinone-dependent pyruvate dehydrogenase | D4M06_RS02945 | Not Available | Negative | 649565 - 651283 | 62012.9 |
| nadh oxidoreductase | D4M06_RS02950 | Not Available | Negative | 651416 - 652384 | 35870.0 |
| hydroxylamine reductase | D4M06_RS02955 | Not Available | Negative | 652396 - 654048 | 60051.3 |
| l-lysine exporter lyso | D4M06_RS02960 | Not Available | Negative | 654192 - 655091 | 32314.1 |
| aquaporin z | D4M06_RS02965 | Not Available | Negative | 655549 - 656244 | 23703.2 |
| atp-dependent endonuclease | D4M06_RS02970 | Not Available | Positive | 656670 - 658328 | 63575.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




