Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitroreductase nfsa | D4M06_RS02825 | Not Available | Positive | 625600 - 626322 | 26852.1 |
| 30s ribosomal protein s6--l-glutamate ligase | D4M06_RS02830 | Not Available | Positive | 626383 - 627285 | 32438.5 |
| ybjn domain-containing protein | D4M06_RS02835 | Not Available | Positive | 627373 - 627849 | 17667.1 |
| spermidine/putrescine abc transporter substrate-binding protein potf | D4M06_RS02840 | Not Available | Positive | 628200 - 629312 | 40783.7 |
| putrescine abc transporter atp-binding subunit potg | D4M06_RS02845 | Not Available | Positive | 629407 - 630540 | 41981.4 |
| putrescine abc transporter permease poth | D4M06_RS02850 | Not Available | Positive | 630550 - 631503 | 35467.6 |
| putrescine abc transporter permease poti | D4M06_RS02855 | Not Available | Positive | 631500 - 632345 | 30475.3 |
| ybjo family protein | D4M06_RS02860 | Not Available | Positive | 632405 - 632893 | 18519.1 |
| 23s rrna (uracil(747)-c(5))-methyltransferase rlmc | D4M06_RS02865 | Not Available | Positive | 632934 - 634061 | 41962.3 |
| pts sugar transporter subunit iic | D4M06_RS02870 | Not Available | Positive | 634341 - 635684 | 48533.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




