Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eal domain-containing protein | D4M06_RS02725 | Not Available | Positive | 606442 - 608790 | 90073.7 |
| diguanylate cyclase | D4M06_RS02730 | Not Available | Positive | 608798 - 610126 | 49879.8 |
| dna-binding transcriptional regulator | D4M06_RS02735 | Not Available | Negative | 610196 - 610525 | 11982.8 |
| type ii toxin-antitoxin system rele/pare family toxin | D4M06_RS02740 | Not Available | Negative | 610515 - 610901 | 14280.2 |
| 30s ribosomal protein s12 methylthiotransferase rimo | D4M06_RS02745 | Not Available | Negative | 611127 - 612452 | 49584.6 |
| biofilm formation regulator bssr | D4M06_RS02750 | Not Available | Positive | 612665 - 613048 | 14536.6 |
| pqq-dependent sugar dehydrogenase | D4M06_RS02755 | Not Available | Positive | 613159 - 614274 | 41116.9 |
| glutathione s-transferase family protein | D4M06_RS02760 | Not Available | Negative | 614271 - 614897 | 23714.4 |
| serine-type d-ala-d-ala carboxypeptidase | D4M06_RS02765 | Not Available | Positive | 615143 - 616345 | 43643.4 |
| dna-binding transcriptional repressor deor | D4M06_RS02770 | Not Available | Negative | 616392 - 617150 | 28549.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




