Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pkhd-type hydroxylase ybix | D4M06_RS02570 | Not Available | Negative | 572101 - 572823 | 27303.4 |
| catecholate siderophore receptor fiu | D4M06_RS02575 | Not Available | Negative | 572829 - 575111 | 81960.4 |
| duf1471 domain-containing protein | D4M06_RS02580 | Not Available | Negative | 575376 - 575636 | 8896.65 |
| 23s rrna (adenine(1618)-n(6))-methyltransferase rlmf | D4M06_RS02585 | Not Available | Positive | 575912 - 576838 | 34130.7 |
| mechanosensitive channel protein | D4M06_RS02590 | Not Available | Negative | 576835 - 579060 | 81940.5 |
| glutamine abc transporter atp-binding protein glnq | D4M06_RS02595 | Not Available | Negative | 579177 - 579899 | 26733.6 |
| glutamine abc transporter permease glnp | D4M06_RS02600 | Not Available | Negative | 579896 - 580555 | 24365.8 |
| glutamine abc transporter substrate-binding protein glnh | D4M06_RS02605 | Not Available | Negative | 580693 - 581439 | 27191.5 |
| dna starvation/stationary phase protection protein dps | D4M06_RS02610 | Not Available | Negative | 581843 - 582346 | 18696.3 |
| threonine/homoserine exporter rhta | D4M06_RS02615 | Not Available | Negative | 582645 - 583532 | 31170.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




