Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal-dependent hydrolase | D4M06_RS02315 | Not Available | Negative | 520161 - 520943 | 29063.8 |
| patatin family protein | D4M06_RS02320 | Not Available | Negative | 520940 - 522013 | 39822.0 |
| duf1328 domain-containing protein | D4M06_RS02325 | Not Available | Negative | 522135 - 522296 | 5536.27 |
| molecular chaperone osmy | D4M06_RS02330 | Not Available | Negative | 522423 - 523028 | 21086.9 |
| peptide chain release factor 3 | D4M06_RS02335 | Not Available | Negative | 523421 - 525010 | 59577.5 |
| pyrimidine 5'-nucleotidase | D4M06_RS02340 | Not Available | Negative | 525101 - 525778 | 25302.0 |
| ribosomal protein s18-alanine n-acetyltransferase | D4M06_RS02345 | Not Available | Negative | 525793 - 526239 | 16610.7 |
| dna polymerase iii subunit psi | D4M06_RS02350 | Not Available | Negative | 526208 - 526621 | 15208.3 |
| 16s rrna (guanine(1207)-n(2))-methyltransferase rsmc | D4M06_RS02355 | Not Available | Positive | 526724 - 527755 | 37603.8 |
| kinase inhibitor | D4M06_RS02415 | Not Available | Negative | 538928 - 539404 | 17072.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




